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Workshop

AIM-FM: Advancements In Medical Foundation Models: Explainability, Robustness, Security, and Beyond

Yixuan Yuan ⋅ Yao Qin ⋅ Xiang Li ⋅ Ying Wei ⋅ Bulat Ibragimov ⋅ Linda Petzold
[ OpenReview] 

Abstract

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Schedule

Timezone: America/Los_Angeles
8:20 AM
8:20 - 8:30 AM: Introduction
Yixuan Yuan
10:40 AM
10:40 - 11:20 AM: Panel Discussion
Pearse Keane ⋅ James Zou ⋅ Tianming Liu ⋅ Faisal Mahmood ⋅ Shekoofeh Azizi
3:30 PM
3:30 - 4:10 PM: Speaker: Animashree Anandkumar
Animashree Anandkumar
VidLPRO: A Video-Language Pre-training Framework for Robotic and Laparoscopic Surgery
Mohammadmahdi Honarmand ⋅ Muhammad Abdullah Jamal ⋅ Omid Mohareri
Biomedical SAM-2: Segment Anything in Biomedical Images and Videos
Zhiling Yan ⋅ Weixiang Sun ⋅ Rong Zhou ⋅ Zhengqing Yuan ⋅ Kai Zhang ⋅ Yiwei Li ⋅ Sekeun Kim ⋅ Sifan Song ⋅ Hui Ren ⋅ Tianming Liu ⋅ Quanzheng Li ⋅ Xiang Li ⋅ Lifang He ⋅ Lichao Sun
Universal Speech Disorder Recognition: Towards a Foundation Model for Cross-Pathology Generalisation
Giulia Sanguedolce ⋅ Dragos-Cristian Gruia ⋅ Sophie Brook ⋅ Patrick Naylor ⋅ Fatemeh Geranmayeh
DAug: Diffusion-based Channel Augmentation for Radiology Image Retrieval and Classification
Zhuoran Zhou ⋅ Zhuoran Zhou ⋅ Haoquan Fang ⋅ Jenq-Neng Hwang
Exploring Fairness in Long-Term Prediction of Type 2 Diabetes Microvascular Complications
Elizabeth Remfry ⋅ Rafael Henkin ⋅ Zainab Awan ⋅ Rohini Mathur ⋅ Michael Barnes ⋅ Aakanksha Naik
MediConfusion: Can you trust your AI radiologist? Probing the reliability of multimodal medical foundation models
Mohammad Shahab Sepehri ⋅ Zalan Fabian ⋅ Maryam Soltanolkotabi ⋅ Mahdi Soltanolkotabi
Going beyond H&E and Oncology: how do Histopathology Foundation Models perform for multi-stain IHC & Immunology?
Amaya Gallagher-Syed ⋅ ELENA PONTARINI ⋅ Myles Lewis ⋅ Greg Slabaugh ⋅ Michael Barnes
Armadillo: Robust Secure Aggregation for Federated Learning with Input Validation
Yiping Ma ⋅ Yue Guo ⋅ Harish Karthikeyan ⋅ Antigoni Polychroniadou
DiversityMedQA: A Benchmark for Assessing Demographic Biases in Medical Diagnosis using Large Language Models
Rajat Rawat ⋅ Hudson McBride ⋅ Rajarshi Ghosh ⋅ Dhiyaan Nirmal ⋅ Jong Moon ⋅ Dhruv Alamari ⋅ Kevin Zhu ⋅ Sean O'Brien
Demographic Bias of Expert-Level Vision-Language Foundation Models in Medical Imaging
Yuzhe Yang ⋅ Yujia Liu ⋅ Xin Liu ⋅ Wei Wu ⋅ Shwetak Patel
Hetero-UNet: Heterogeneous Transformer with Mamba for Medical Image Segmentation
Zhiling Yan ⋅ yixin liu ⋅ Xiang Li ⋅ Lichao Sun
GPT Sonograpy: Hand Gesture Decoding from Forearm Ultrasound Images via VLM
Keshav Bimbraw ⋅ Ye Wang ⋅ Jing Liu ⋅ Toshiaki Koike-Akino
Synthetic Multimodal Data Generation and Training Optimization For Computed Tomography Cardiac Imaging Applications
Masaki Ikuta ⋅ Quanqi Hu ⋅ Ashok Addala ⋅ Ravi Soni ⋅ Avinash Gopal
PATIENT-Ψ: Using Large Language Models to Simulate Patients for Training Mental Health Professionals
Ruiyi Wang ⋅ Stephanie Milani ⋅ Jamie Chiu ⋅ Jiayin Zhi ⋅ Shaun Eack ⋅ Travis Labrum ⋅ Samuel Murphy ⋅ Nev Jones ⋅ Kate Hardy ⋅ Hong Shen ⋅ Fei Fang ⋅ Zhiyu Chen
Learning biologically relevant features in a pathology foundation model using sparse autoencoders
Nhat Le ⋅ Neel Patel ⋅ Ciyue Shen ⋅ Blake Martin ⋅ Alfred Eng ⋅ Chintan Shah ⋅ Sean Grullon ⋅ Dinkar Juyal
Necessity of Uncertainty Quantification for Audio-driven Healthcare Diagnosis
Shubham Kulkarni ⋅ Hideaki Watanabe ⋅ Fuminori Homma
ProMISe: Promptable Medical Image Segmentation using SAM
Jinfeng Wang ⋅ Sifan Song ⋅ Xinkun Wang ⋅ yiyi wang ⋅ Yiyi Miao ⋅ Jionglong Su ⋅ S. Kevin Zhou
Do Large Language Models have Shared Weaknesses in Medical Question Answering?
Andrew M. Bean ⋅ Karolina Korgul ⋅ Felix Krones ⋅ Robert McCraith ⋅ Adam Mahdi
Med-FastSAM: Improving Transfer Efficiency of SAM to Domain-Generalised Medical Image Segmentation
Yuxiang Luo ⋅ Qing Xu ⋅ Jinglei Feng ⋅ Guangwu Qian ⋅ Wenting Duan
Sentiment Reasoning for Healthcare
Khai-Nguyen Nguyen ⋅ Khai Le-Duc ⋅ Bach Phan Tat ⋅ Duy Le ⋅ Phuc H Ngo ⋅ Long Vo-Dang ⋅ Anh Nguyen ⋅ Truong Son Hy
Surgical SAM 2: Real-time Segment Anything in Surgical Video by Efficient Frame Pruning
Haofeng Liu ⋅ Erli Zhang ⋅ Junde Wu ⋅ Mingxuan Hong ⋅ Yueming Jin
Do Histopathological Foundation Models Eliminate Batch Effects? A Comparative Study
Jonah Kömen ⋅ Hannah Marienwald ⋅ Jonas Dippel ⋅ Julius Hense
A Self-Supervised Model for Multi-modal Stroke Risk Prediction
Camille Delgrange ⋅ Olga Demler ⋅ Samia Mora ⋅ bjoern menze ⋅ Ezequiel De la Rosa ⋅ Neda Davoudi
Improving the Classification Effect of Clinical Images of Diseases for Multi-Source Privacy Protection
Bowen Tian ⋅ Zhengyang Xu ⋅ Zihao Yin ⋅ JingyingWang ⋅ Yutao Yue
Contextual Evaluation of Large Language Models for Classifying Tropical and Infectious Diseases
Mercy Asiedu ⋅ Nenad Tomasev ⋅ Chintan Ghate ⋅ Tiya Tiyasirichokchai ⋅ Awa Dieng ⋅ Geoffrey Siwo ⋅ Steve Adudans ⋅ Oluwatosin Akande ⋅ Katherine Heller
A Textbook Remedy for Domain Shifts: Knowledge Priors for Medical Image Analysis
Yue Yang ⋅ Mona Gandhi ⋅ Yufei Wang ⋅ Yifan Wu ⋅ Michael Yao ⋅ Chris Callison-Burch ⋅ James Gee ⋅ Mark Yatskar
Research Journey of Generative Protein Modeling
Xinhui Chen ⋅ Yiwen Yuan ⋅ Joseph Liu ⋅ Chak Tou Leong ⋅ Zhen Xie ⋅ Xiaoye Zhu ⋅ Ying Chen ⋅ Songyue Chen ⋅ Chenyi Wang ⋅ Kun Li ⋅ Jie Zhang ⋅ Zuchao Li ⋅ Jiaqi Chen
Towards Foundation Models for Critical Care Time Series
Manuel Burger ⋅ Fedor Sergeev ⋅ Malte Londschien ⋅ Daphné Chopard ⋅ Hugo Yèche ⋅ Eike Gerdes ⋅ Polina Leshetkina ⋅ Alexander Morgenroth ⋅ Zeynep Babür ⋅ Jasmina Bogojeska ⋅ Martin Faltys ⋅ Rita Kuznetsova ⋅ Gunnar Rätsch
Random Token Fusion for Multi-View Medical Diagnosis
Jingyu Guo ⋅ Christos Matsoukas ⋅ Fredrik Strand ⋅ Kevin Smith
A self-supervised framework for learning whole slide representations
Xinhai Hou ⋅ Cheng Jiang ⋅ Akhil Kondepudi ⋅ Yiwei Lyu ⋅ Asadur Chowdury ⋅ Honglak Lee ⋅ Todd Hollon
SAM-MPA: Applying SAM to Few-shot Medical Image Segmentation using Mask Propagation and Auto-prompting
Jie Xu ⋅ LiXiaokang ⋅ Chengyuyue ⋅ Chen Ma ⋅ yi guo ⋅ Yuanyuan Wang
TTT-UNet: Enhancing U-Net with Test-Time Training Layers for Biomedical Image Segmentation
Rong Zhou ⋅ Zhengqing Yuan ⋅ Zhiling Yan ⋅ Weixiang Sun ⋅ Kai Zhang ⋅ Yiwei Li ⋅ Xiang Li ⋅ Quanzheng Li ⋅ Lifang He ⋅ Lichao Sun
Promoting cross-modal representations to improve multimodal foundation models for physiological signals
Ching Fang ⋅ Christopher Sandino ⋅ Behrooz Mahasseni ⋅ Juri Minxha ⋅ Hadi Pouransari ⋅ Erdrin Azemi ⋅ Ali Moin ⋅ Ellen Zippi
JRadiEvo: A Japanese Radiology Report Generation Model Enhanced by Evolutionary Optimization of Model Merging
Kaito Baba ⋅ Ryota Yagi ⋅ Junichiro Takahashi ⋅ Risa Kishikawa ⋅ satoshi kodera
Fairness Of AI Models in vector embedded Chest X-ray representations
Gebreyowhans H. Bahre ⋅ Hassan Hamidi ⋅ Francesco Calimeri ⋅ Andrew Sellergren ⋅ Leo Anthony Celi ⋅ Laleh Seyyed-Kalantari
Catching the Spikes: Heteroscedastic Uncertainty Quantification for Enhanced Malaria Prediction
Feng Chen ⋅ Qi Qi ⋅ Jiayu Qiu ⋅ Kemeng Zhang ⋅ Xiang Li
Multimodal Lego: Model Merging and Fine-Tuning Across Topologies and Modalities
Konstantin Hemker ⋅ Nikola Simidjievski ⋅ Mateja Jamnik
Neural machine translation of clinical procedure codes for medical diagnosis and uncertainty quantification
Pei-Hung Chung ⋅ Shuhan He ⋅ Norawit Kijpaisalratana ⋅ Abdel Ariss ⋅ Byung-Jun Yoon
A Benchmark for Long-Form Medical Question Answering
Pedram Hosseini ⋅ Jessica Sin ⋅ Bing Ren ⋅ Bryceton Thomas ⋅ Elnaz Nouri ⋅ Ali Farahanchi ⋅ Saeed Hassanpour
Gaze-Assisted Medical Image Segmentation
Leila Khaertdinova ⋅ Ilya Pershin ⋅ Tatyana Shmykova ⋅ Bulat Ibragimov
Cell ontology guided transcriptome foundation model
XINYU YUAN ⋅ Zhihao Zhan ⋅ Zuobai Zhang ⋅ Manqi Zhou ⋅ Jianan Zhao ⋅ Boyu Han ⋅ Yue Li ⋅ Jian Tang
Explaining Chest X-ray Pathology Models using Textual Concepts
Vijay Sadashivaiah ⋅ Pingkun Yan ⋅ James Hendler
Towards a Personal Health Large Language Model
Justin Cosentino ⋅ Anastasiya Belyaeva ⋅ Xin Liu ⋅ Zhun Yang ⋅ Yun Liu ⋅ Shyam Tailor ⋅ Tim Althoff ⋅ John Hernandez ⋅ Yossi Matias ⋅ Greg Corrado ⋅ Shwetak Patel ⋅ Shravya Shetty ⋅ Jiening Zhan ⋅ Daniel McDuff ⋅ Cory McLean