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Workshop
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Antibody Library Design by Seeding Linear Programming with Inverse Folding and Protein Language Models
Conor Hayes · Andre Goncalves · Steven Magana-Zook · Ahmet Solak · Daniel faissol · Mikel Landajuela
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Workshop
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Benchmarking text-integrated protein language model embeddings and embedding fusion on diverse downstream tasks
Young Su Ko
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Workshop
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SuperMetal: A Generative AI Framework for Rapid and Precise Metal Ion Location Prediction in Proteins
Xiaobo Lin · Zhaoqian Su · Yunchao Liu · Jingxian Liu · Xiaohan Kuang · Jesse Spencer-Smith
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Workshop
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PLMFit: Benchmarking Transfer Learning with Protein Language Models for Protein Engineering
Thomas Bikias · Evangelos Stamkopoulos · Sai Reddy
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Workshop
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Sun 8:35
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Noeliz Ferruz: Tailored protein design with Conditional Language models
Noelia Ferruz
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Workshop
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Sun 10:50
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Gabe Rocklin: Learning the determinants of protein folding energy landscapes from large-scale experiments
Gabriel Rocklin
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Poster
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Thu 16:30
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Ultrafast classical phylogenetic method beats large protein language models on variant effect prediction
Sebastian Prillo · Wilson Wu · Yun Song
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Poster
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Wed 16:30
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MSA Generation with Seqs2Seqs Pretraining: Advancing Protein Structure Predictions
LE ZHANG · Jiayang Chen · Tao Shen · Yu Li · Siqi Sun
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Poster
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Wed 16:30
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Bridge-IF: Learning Inverse Protein Folding with Markov Bridges
Yiheng Zhu · Jialu Wu · Qiuyi Li · Jiahuan Yan · Mingze Yin · Wei Wu · Mingyang Li · Jieping Ye · Zheng Wang · Jian Wu
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Poster
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Wed 16:30
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ReactZyme: A Benchmark for Enzyme-Reaction Prediction
Chenqing Hua · Bozitao Zhong · Sitao Luan · Liang Hong · Guy Wolf · Doina Precup · Shuangjia Zheng
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Poster
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Fri 16:30
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Towards Stable Representations for Protein Interface Prediction
Ziqi Gao · Zijing Liu · Yu Li · Jia Li
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Workshop
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Protein Sequence Domain Annotation using Language Models
Arpan Sarkar · Kumaresh Krishnan · Sean Eddy
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