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Workshop
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Sun 13:30
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Milot Mirdita: Challenges to metagenomic annotation with Foldseek and protein language models
Milot Mirdita
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Workshop
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A Safety-aware Framework for Generative Enzyme Design with Foundation Models
Xiaoyi Fu · Tao Han · Yuan Yao · Song Guo
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Workshop
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Fine-Tuning Discrete Diffusion Models via Reward Optimization with Applications to DNA and Protein Design
Chenyu Wang · Masatoshi Uehara · Yichun He · Amy Wang · Tommaso Biancalani · Avantika Lal · Tommi Jaakkola · Sergey Levine · Hanchen Wang · Aviv Regev
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Workshop
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PLMFit: Benchmarking Transfer Learning with Protein Language Models for Protein Engineering
Thomas Bikias · Evangelos Stamkopoulos · Sai Reddy
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Poster
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Wed 16:30
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ProtGO: Function-Guided Protein Modeling for Unified Representation Learning
Bozhen Hu · Cheng Tan · Yongjie Xu · Zhangyang Gao · Jun Xia · Lirong Wu · Stan Z. Li
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Workshop
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Ranking protein binding affinities with protein language models
Charles Charbel CHALAS · Michael P Dunne · Michael Dunne · charles chalas
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Workshop
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Generative modeling of protein ensembles guided by crystallographic electron densities
Sai Advaith Maddipatla · Nadav Sellam · Sanketh Vedula · Ailie Marx · Alex Bronstein
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Poster
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Fri 11:00
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Protein-Nucleic Acid Complex Modeling with Frame Averaging Transformer
Tinglin Huang · Zhenqiao Song · Rex Ying · Wengong Jin
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Workshop
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ProtDiff: Function-Conditioned Masked Diffusion Models for Robust Directed Protein Generation
Vishrut Thoutam
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Workshop
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ProtDiff: Function-Conditioned Masked Diffusion Models for Robust Directed Protein Generation
Vishrut Thoutam · Dina Ellsworth
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Workshop
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Sun 8:35
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Noeliz Ferruz: Tailored protein design with Conditional Language models
Noelia Ferruz
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Workshop
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Protein Language Model Fitness is a Matter of Preference
Cade Gordon · Amy Lu · Pieter Abbeel
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