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156 Results
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Workshop
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TopoDiff: Improve Protein Backbone Generation with Topology-aware Latent Encoding Yuyang Zhang · Zinnia Ma · Haipeng Gong |
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In vitro validated antibody design against multiple therapeutic antigens using generative inverse folding Amir Shanehsazzadeh |
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Validation of de novo designed water-soluble and membrane proteins by in silico folding and melting. Alvaro Martin · Carolin Berner · Sergey Ovchinnikov · Anastassia Vorobieva |
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Pre-training Sequence, Structure, and Surface Features for Comprehensive Protein Representation Learning Youhan Lee · Hasun Yu · Jaemyung Lee · Jaehoon Kim |
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Target-Aware Variational Auto-Encoders for Ligand Generation with Multi-Modal Protein Modeling Khang Ngo · Truong Son Hy |
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Protein generation with evolutionary diffusion Sarah Alamdari · Nitya Thakkar · Rianne van den Berg · Alex X Lu · Nicolo Fusi · Ava Amini · Kevin Yang |
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AlphaFold Distillation for Protein Design Igor Melnyk · Aurelie Lozano · Payel Das · Vijil Chenthamarakshan |
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Exploiting language models for protein discovery with latent walk-jump sampling Sai Pooja Mahajan · Nathan Frey · Dan Berenberg · Joseph Kleinhenz · Richard Bonneau · Vladimir Gligorijevic · Andrew Watkins · Saeed Saremi |
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FrameDiPT: SE(3) Diffusion Model for Protein Structure Inpainting Cheng ZHANG · Adam Leach · Thomas Makkink · Miguel Arbesú · Ibtissem Kadri · Daniel Luo · Liron Mizrahi · Sabrine Krichen · Maren Lang · Andrey Tovchigrechko · Nicolas Lopez Carranza · Ugur Sahin · Karim Beguir · Michael Rooney · Yunguan Fu |
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Workshop
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TopoDiff: Improve Protein Backbone Generation with Topology-aware Latent Encoding Yuyang Zhang · Zinnia Ma · Haipeng Gong |
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Workshop
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Frame2seq: structure-conditioned masked language modeling for protein sequence design Deniz Akpinaroglu · Kosuke Seki · Eleanor Zhu · Tanja Kortemme |
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AMP-Diffusion: Integrating Latent Diffusion with Protein Language Models for Antimicrobial Peptide Generation Tianlai Chen · Pranay Vure · Rishab Pulugurta · Pranam Chatterjee |