Timezone: »
Modern recording techniques now allow us to record from distinct neuronal populations in different brain networks. However, especially as we consider multiple (more than two) populations, new conceptual and statistical frameworks are needed to characterize the multi-dimensional, concurrent flow of signals among these populations. Here, we develop a dimensionality reduction framework that determines (1) the subset of populations described by each latent dimension, (2) the direction of signal flow among those populations, and (3) how those signals evolve over time within and across experimental trials. We illustrate these features in simulation, and further validate the method by applying it to previously studied recordings from neuronal populations in macaque visual areas V1 and V2. Then we study interactions across select laminar compartments of areas V1, V2, and V3d, recorded simultaneously with multiple Neuropixels probes. Our approach uncovered signatures of selective communication across these three areas that related to their retinotopic alignment. This work advances the study of concurrent signaling across multiple neuronal populations.
Author Information
Evren Gokcen (CMU, Carnegie Mellon University)
Anna Jasper (Albert Einstein College of Medicine)
Alison Xu (Albert Einstein College of Medicine)
Adam Kohn (Einsteinmed)
Christian Machens (Fundacao Champalimaud PT507131827)
Byron M Yu (Carnegie Mellon University)
More from the Same Authors
-
2020 Poster: Understanding spiking networks through convex optimization »
Allan Mancoo · Sander Keemink · Christian Machens -
2020 Poster: Compact task representations as a normative model for higher-order brain activity »
Severin Berger · Christian Machens -
2017 Poster: Adaptive stimulus selection for optimizing neural population responses »
Benjamin Cowley · Ryan Williamson · Katerina Clemens · Matthew Smith · Byron M Yu -
2014 Poster: Unsupervised learning of an efficient short-term memory network »
Pietro Vertechi · Wieland Brendel · Christian Machens -
2014 Poster: Extracting Latent Structure From Multiple Interacting Neural Populations »
Joao Semedo · Amin Zandvakili · Adam Kohn · Christian Machens · Byron M Yu -
2014 Spotlight: Unsupervised learning of an efficient short-term memory network »
Pietro Vertechi · Wieland Brendel · Christian Machens -
2014 Poster: Deterministic Symmetric Positive Semidefinite Matrix Completion »
William E Bishop · Byron M Yu -
2014 Session: Oral Session 5 »
Byron M Yu -
2013 Poster: Firing rate predictions in optimal balanced networks »
David G Barrett · Sophie Denève · Christian Machens -
2012 Poster: Learning optimal spike-based representations »
Ralph Bourdoukan · David Barrett · Christian Machens · Sophie Denève -
2011 Oral: Empirical models of spiking in neural populations »
Jakob H Macke · Lars Buesing · John P Cunningham · Byron M Yu · Krishna V Shenoy · Maneesh Sahani -
2011 Poster: Empirical models of spiking in neural populations »
Jakob H Macke · Lars Buesing · John P Cunningham · Byron M Yu · Krishna V Shenoy · Maneesh Sahani -
2011 Poster: Demixed Principal Component Analysis »
Wieland Brendel · Ranulfo Romo · Christian Machens -
2011 Poster: Dynamical segmentation of single trials from population neural data »
Biljana Petreska · Byron M Yu · John P Cunningham · Gopal Santhanam · Stephen I Ryu · Krishna V Shenoy · Maneesh Sahani -
2008 Poster: Gaussian-process factor analysis for low-dimensional single-trial analysis of neural population activity »
Byron M Yu · John P Cunningham · Gopal Santhanam · Stephen I Ryu · Krishna V Shenoy · Maneesh Sahani -
2007 Spotlight: Inferring Neural Firing Rates from Spike Trains Using Gaussian Processes »
John P Cunningham · Byron M Yu · Krishna V Shenoy · Maneesh Sahani -
2007 Poster: Inferring Neural Firing Rates from Spike Trains Using Gaussian Processes »
John P Cunningham · Byron M Yu · Krishna V Shenoy · Maneesh Sahani