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Workshop
Machine Learning in Structural Biology
Ellen Zhong · Raphael Townshend · Stephan Eismann · Namrata Anand · Roshan Rao · John Ingraham · Wouter Boomsma · Sergey Ovchinnikov · Bonnie Berger

Mon Dec 13 06:00 AM -- 04:00 PM (PST) @ None
Event URL: https://www.mlsb.io/ »

Structural biology, the study of proteins and other biomolecules through their 3D structures, is a field on the cusp of transformation. While measuring and interpreting biomolecular structures has traditionally been an expensive and difficult endeavor, recent machine-learning based modeling approaches have shown that it will become routine to predict and reason about structure at proteome scales with unprecedented atomic resolution. This broad liberation of 3D structure within bioscience and biomedicine will likely have transformative impacts on our ability to create effective medicines, to understand and engineer biology, and to design new molecular materials and machinery. Machine learning also shows great promise to continue to revolutionize many core technical problems in structural biology, including protein design, modeling protein dynamics, predicting higher order complexes, and integrating learning with experimental structure determination.

At this inflection point, we hope that the Machine Learning in Structural Biology (MLSB) workshop will help bring community and direction to this rising field. To achieve these goals, this workshop will bring together researchers from a unique and diverse set of domains, including core machine learning, computational biology, experimental structural biology, geometric deep learning, and natural language processing.

Mon 6:00 a.m. - 6:10 a.m.
Opening remarks
Mon 6:10 a.m. - 6:30 a.m.
Invited Talk 1: Michael Bronstein (Invited talk)
Michael Bronstein, Ellen Zhong
Mon 6:30 a.m. - 6:50 a.m.
Invited Talk 2: Cecilia Clementi (Invited talk)
Ellen Zhong
Mon 6:50 a.m. - 7:10 a.m.
Invited Talk 3: Lucy Colwell (Invited talk)
Ellen Zhong
Mon 7:10 a.m. - 7:20 a.m.
Contributed Talk 1 (Contributed talk)
Mon 7:20 a.m. - 7:30 a.m.
Contributed Talk 2 (Contributed talk)
Mon 7:40 a.m. - 7:50 a.m.
Break
Mon 7:50 a.m. - 8:30 a.m.
Keynote 1: John Jumper (Keynote speaker)
John Jumper, Ellen Zhong
Mon 8:30 a.m. - 9:30 a.m.
Poster Session 1 (Poster Session)
Mon 9:30 a.m. - 10:30 a.m.
Panel Discussion
Mon 10:30 a.m. - 11:10 a.m.
Keynote 2: Jane Richardson (Keynote speaker)
Ellen Zhong
Mon 11:10 a.m. - 11:20 a.m.
Break
Mon 11:20 a.m. - 11:30 a.m.
Contributed Talk 4 (Contributed talk)
Mon 11:30 a.m. - 11:40 a.m.
Contributed Talk 5 (Contributed talk)
Mon 11:40 a.m. - 11:50 a.m.
Contributed Talk 6 (Contributed talk)
Mon 11:50 a.m. - 12:00 p.m.
Contributed Talk 7 (Contributed talk)
Mon 12:00 p.m. - 12:10 p.m.
Contributed Talk 8 (Contributed talk)
Mon 12:10 p.m. - 1:10 p.m.
Poster Session 2 (Poster Session)
Mon 1:10 p.m. - 1:30 p.m.
Invited Talk 4: Derek Lowe (Invited talk)
Ellen Zhong
Mon 1:30 p.m. - 1:50 p.m.
Invited Talk 5: Regina Barzilay (Invited talk)
Regina Barzilay, Ellen Zhong
Mon 1:50 p.m. - 2:10 p.m.
Invited Talk 6: Amy Keating (Invited talk)
Amy Keating, Ellen Zhong
Mon 2:10 p.m. - 2:20 p.m.
Closing remarks
Mon 2:20 p.m. - 4:00 p.m.
Social hour

Author Information

Ellen Zhong (Massachusetts Institute of Technology)
Raphael Townshend (Stanford University)
Stephan Eismann (Stanford University)
Namrata Anand (Stanford University)
Roshan Rao (UC Berkeley)
John Ingraham (Generate Biomedicines)
Wouter Boomsma (University of Copenhagen)
Sergey Ovchinnikov (Harvard)
Bonnie Berger (MIT)

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